Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs74449044 chr4:70092289 G/A 4.7E-13 119 41.77 35 6 KM Plot
THYM rs74481721 chr4:70275450 G/A 4.8E-13 119 41.22 42.3 6 KM Plot
THYM rs745099 chr2:106733554 C/T 0.000205 119 27.68 35.77 42.9 KM Plot
THYM rs74597132 chr4:70292120 A/T 6.15E-13 118 41.77 42.3 6 KM Plot
THYM rs7462674 chr8:50174122 G/A 3.26E-10 117 46.27 51.53 25.83 KM Plot
THYM rs74681080 chr2:10956550 T/C 0.000218 117 42.9 38.58 62.72 KM Plot
THYM rs74725542 chr4:70062198 G/A 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs74734268 chr4:70046567 C/T 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs74788293 chr4:70303074 A/C 4.7E-13 119 41.77 35 6 KM Plot
THYM rs74809393 chr11:20031520 C/A 4.03E-6 118 42.73 32.7 13.75 KM Plot
THYM rs74841319 chr11:20027707 A/T 3.35E-6 118 42.73 27.1 13.75 KM Plot
THYM rs74866529 chr4:70063616 G/T 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs74877579 chr5:149879246 C/T 1.5E-8 118 41.22 35.13 12.63 KM Plot
THYM rs74923404 chr4:70044913 G/T 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs74925218 chr15:78796732 C/T 3.73E-5 118 42.73 42.47 26 KM Plot